Protein ZmOrphan3
ZmOrphan3 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan3
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: B4FEE4

Protein ZmOrphan3

ZmOrphan3 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00917
Zm00001eb321820_T003
Zm00001eb321820_T001
Zm00001eb321820_T002
Zm00001eb321820_T004
Zm00001eb321820_T005
Zm00001eb321820_T006

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d021528DAPseq no logo sequence fimo position
Zm00001d021528DAPseq no logo sequence fimo position
Zm00001d021528ChIPseq no logo sequence fimo position
Zm00001d021528PChIPseq no logo sequence fimo position

Interactions where ZmOrphan3 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan3 is the target  
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There are 93 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb321820_T003 from maize genome v5

Amino Acid Sequence
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MGNLHAKGAGTGAKGAGAANTSISNSRDSMSNAATPSPVEQATFKWVIDGFSSLLDKDQGWTYSNVFELMGVEWYLKLNP
KYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNN
SCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFL
KMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISG
SSKTEYSM

MGNLHAKGAGTGAKGAGAANTSISNSRDSMSNAATPSPVEQATFKWVIDGFSSLLDKDQGWTYSNVFELMGVEWYLKLNP
KYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNN
SCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFL
KMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISG
SSKTEYSM

MGNLHAKGAGTGAKGAGAANTSISNSRDSMSNAATPSPVEQATFKWVIDGFSSLLDKDQGWTYSNVFELMGVEWYLKLNP
KYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNN
SCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFL
KMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISG
SSKTEYSM

MGNLHAKGAGTGAKGAGAANTSISNSRDSMSNAATPSPVEQATFKWVIDGFSSLLDKDQGWTYSNVFELMGVEWYLKLNP
KYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNN
SCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFL
KMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISG
SSKTEYSM

MGNLHAKGAGTGAKGAGAANTSISNSRDSMSNAATPSPVEQATFKWVIDGFSSLLDKDQGWTYSNVFELMGVEWYLKLNP
KYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNN
SCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFL
KMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISG
SSKTEYSM

MGNLHAKGAGTGAKGAGAANTSISNSRDSMSNAATPSPVEQATFKWVIDGFSSLLDKDQGWTYSNVFELMGVEWYLKLNP
KYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNN
SCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFL
KMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISG
SSKTEYSM

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00917
PF00917
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Nucleotide Sequence
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CAAAGTTCGGAAACCACACGAAAAC...

GRMZM2G134716_T01 from maize genome v3

Amino Acid Sequence
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MIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNNSCVFGIGFIKVATIKVNTTLETLFVRKMNIFNE
AKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFLKMKKTNDVPKGSGSLVEFALSIKDQENGKDRKY
PGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISGSSKTEYSM

Nucleotide Sequence
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GCCCTCTGGCCCAGCGCCATGGCCA...

GRMZM2G134716_T02 from maize genome v3


Related TFome: pUT5999

Amino Acid Sequence
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MGNLHAKGAGTGAKGAGAANTSISNSRDSMSNAATPSPVEQATFKWVIDGFSSLLDKDQGWTYSNVFELMGVEWYLKLNP
KYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNN
SCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFL
KMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISG
SSKTEYSM

Nucleotide Sequence
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GCAGAACTGCATAAAACCCCACCCC...

GRMZM2G134716_T03 from maize genome v3

Amino Acid Sequence
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MKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISGS
SKTEYSM

Nucleotide Sequence
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GCCCTCTGGCCCAGCGCCATGGCCA...

GRMZM2G134716_T04 from maize genome v3

Amino Acid Sequence
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MIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNNSCVFGIGFIKVATIKVNTTLETLFVRKMNIFNE
AKVYTWKIEDFSALKNPSHSPEFEIAGYTW

Nucleotide Sequence
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AACTTCAGCCATTCGATTCTTGATT...

GRMZM2G134716_T05 from maize genome v3

Amino Acid Sequence
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MIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNNSCVFGIGFIKVATIKVNTTLETLFVRKMNIFNE
AKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFLKMKKTNDVPKGSGSLVEFALSIKDQENGKDRKY
PGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISGSSKTEYSM

Nucleotide Sequence
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CTCCACTACTTGACAGCCACGGATC...

GRMZM2G134716_T06 from maize genome v3

Amino Acid Sequence
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MRYLKLNPKYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQ
SSRFIVNNSCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYD
GNSLSLFLKMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCI
EAEVAISGSSKTEYSM

Nucleotide Sequence
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AACTTCAGCCATTCGATTCTTGATT...

GRMZM2G134716_T07 from maize genome v3

Amino Acid Sequence
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MIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNNSCVFGIGFIKVATIKVNTTLETLFVRKMNIFNE
AKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFLKMKKTNDVPKGSGSLVEFALSIKDQENGKDRKY
PGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISGSSKTEYSM

Nucleotide Sequence
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GCCCTCTGGCCCAGCGCCATGGCCA...

Zm00001d021528_T001 from maize genome v4

Amino Acid Sequence
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MGNLHAKGAGTGAKGAGAANTSISNSRDSMSNAATPSPVEQATFKWVIDGFSSLLDKDQGWTYSNVFELMGVEWYLKLNP
KYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNN
SCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFL
KMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISG
SSKTEYSM

Nucleotide Sequence
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AGAGGCAGAGAGGCCCTCTGGCCCA...

Zm00001d021528_T002 from maize genome v4

Amino Acid Sequence
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MGNLHAKGAGTGAKGAGAANTSISNSRDSMSNAATPSPVEQATFKWVIDGFSSLLDKDQGWTYSNVFELMGVEWYLKLNP
KYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNN
SCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFL
KMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISG
SSKTEYSM

Nucleotide Sequence
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CTCGAAGCCTCGGATCTCCGCCGAG...

Zm00001d021528_T003 from maize genome v4

Amino Acid Sequence
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MIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNNSCVFGIGFIKVATIKVNTTLETLFVRKMNIFNE
AKVYTWKIEDFSALKNPSHSPEFEIAGYTW

Nucleotide Sequence
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GCCTCTCCACTACTTGACAGCCACG...

Zm00001eb321820_T001 from maize genome v5

Amino Acid Sequence
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MGNLHAKGAGTGAKGAGAANTSISNSRDSMSNAATPSPVEQATFKWVIDGFSSLLDKDQGWTYSNVFELMGVEWYLKLNP
KYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNN
SCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFL
KMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISG
SSKTEYSM

Nucleotide Sequence
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GCACACTCGGGATCACGGATCTTCC...

Zm00001eb321820_T002 from maize genome v5

Amino Acid Sequence
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MGNLHAKGAGTGAKGAGAANTSISNSRDSMSNAATPSPVEQATFKWVIDGFSSLLDKDQGWTYSNVFELMGVEWYLKLNP
KYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTAKTLFVRKMNIFNEAKVYTWKIEDFS
ALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFLKMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHR
WGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISGSSKTEYSM

Nucleotide Sequence
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AGAGGCAGAGAGGCCCTCTGGCCCA...

Zm00001eb321820_T004 from maize genome v5

Amino Acid Sequence
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MIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNNSCVFGIGFIKVATIKVNTTLETLFVRKMNIFNE
AKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFLKMKKTNDVPKGSGSLVEFALSIKDQENGKDRKY
PGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISGSSKTEYSM

Nucleotide Sequence
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CTCGAAGCCTCGGATCTCCGCCGAG...

Zm00001eb321820_T005 from maize genome v5

Amino Acid Sequence
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MGNLHAKGAGTGAKGAANTSISNSRDSMSNAATPSPVEQATFKWVIDGFSSLLDKDQGWTYSNVFELMGVEWYLKLNPKY
EVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQSSRFIVNNSC
VFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYDGNSLSLFLKM
KKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCIEAEVAISGSS
KTEYSM

Nucleotide Sequence
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ATGGGCAACCTTCACGCCAAAGGTG...

Zm00001eb321820_T006 from maize genome v5

Amino Acid Sequence
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MRYLKLNPKYEVSNEECVSLRLELSQSSVKLDTIFEASFKFMIYDQLIGKHKVHLGNHSFQTASTSSAIAFMLPLKALRQ
SSRFIVNNSCVFGIGFIKVATIKVNTTLETLFVRKMNIFNEAKVYTWKIEDFSALKNPSHSPEFEIAGYTWIISLNPSYD
GNSLSLFLKMKKTNDVPKGSGSLVEFALSIKDQENGKDRKYPGRCQFSSKHHRWGWKKFISLEDFKDSSKGYLIKGKCCI
EAEVAISGSSKTEYSM

Nucleotide Sequence
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ACATCGGACTCATCTCCTTCGATTC...


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